Index Catalog // Scholar@UC

User Collection

Type:: Collection
Description/Abstract:: This collection of three works contains the data sets supporting the publication "Convergence in Viral Epidemic Research: Using Natural Language Processing to Define Network Bridges in the Bench-Bedside-Population Paradigm" submitted to the Harvard Data Science Review in November 2020. The authors were Margaret Powers, Erin McCabe, Sally Luken, Danny Wu, Philip Hagedorn, Ezra Edgerton, Amy Koshoffer, Dorcas Washington, Suraj Kannayyagari, Jennifer Latessa, and James Lee.
Creator/Author:: Koshoffer, Amy; Wu, Danny; Edgerton, Ezra ; Powers, Margaret; Latessa, Jennifer; Luken, Sally; McCabe, Erin; Washington, Dorcas; Kannayyagar, Suraj ; Lee, James, and Hagedorn, Philip
Submitter:: Amy Koshoffer
License:: CC0 1.0 Universal

0Collections

7Works

Type:: Dataset
Description/Abstract:: The data sets were derived from coronavirus related scientific literature using the CORD-19 dataset released by the Allen Institute of Artificial Intelligence as of July 14, 2020, using the Elasticsearch engine hosted by the Digital Scholarship Center (DSC). Through indexing the full-text and the metadata of the article corpus, the research team generated a full-corpus model and 7 different models corresponding to key viral outbreaks from the past several decades' coronaviruses (SARS-CoV, MERS-CoV, and SARS- CoV-2) and non-coronaviruses (HIV, Zika, H1N1, and Ebola). The targeted subsets of the articles used two or more occurrences of virus-specific keywords drawn from conventions established by the World Health Organization.
Creator/Author:: Koshoffer, Amy; Wu, Danny; Latessa, Jenny; Kannayyagar, Suraj; Luken, Sally; McCabe, Erin; Edgerton, Ezra; Washington, Dorcas; Lee, James; Powers, Margaret, and Hagedorn, Philip
Submitter:: Amy Koshoffer
Date Uploaded:: 10/30/2020
Date Modified:: 11/05/2020
Date Created:: 2020-07
License:: CC0 1.0 Universal

Type:: Dataset
Description/Abstract:: The data sets were derived from coronavirus related scientific literature using the CORD-19 dataset released by the Allen Institute of Artificial Intelligence as of July 14, 2020, using the Elasticsearch engine hosted by the Digital Scholarship Center (DSC). Through indexing the full-text and the metadata of the article corpus, the research team generated a full-corpus model and 7 different models corresponding to key viral outbreaks from the past several decades' coronaviruses (SARS-CoV, MERS-CoV, and SARS- CoV-2) and non-coronaviruses (HIV, Zika, H1N1, and Ebola). The targeted subsets of the articles used two or more occurrences of virus-specific keywords drawn from conventions established by the World Health Organization.
Creator/Author:: Koshoffer, Amy; Hagedorn, Philip ; Latessa, Jenny; Lee, James; Power, Margaret; Luken, Sally; McCabe, Erin; Wu. Danny; Washington, Dorcas; Kannayyagar, Suraj, and Edgerton, Ezra
Submitter:: Amy Koshoffer
Date Uploaded:: 10/29/2020
Date Modified:: 11/05/2020
Date Created:: 2020-07
License:: CC0 1.0 Universal

Type:: Dataset
Description/Abstract:: The data sets were derived from coronavirus related scientific literature using the CORD-19 dataset released by the Allen Institute of Artificial Intelligence as of July 14, 2020, using the Elasticsearch engine hosted by the Digital Scholarship Center (DSC). Through indexing the full-text and the metadata of the article corpus, the research team generated a full-corpus model and 7 different models corresponding to key viral outbreaks from the past several decades' coronaviruses (SARS-CoV, MERS-CoV, and SARS- CoV-2) and non-coronaviruses (HIV, Zika, H1N1, and Ebola). The targeted subsets of the articles used two or more occurrences of virus-specific keywords drawn from conventions established by the World Health Organization.
Creator/Author:: Koshoffer, Amy; Wu, Danny; Latessa, Jenny; Lee, James; Luken, Sally; McCabe, Erin; Edgerton, Ezra; Washington, Dorcas; Kannayyagar, Suraj, and Powers, Margaret
Submitter:: Amy Koshoffer
Date Uploaded:: 10/29/2020
Date Modified:: 11/05/2020
Date Created:: 2020-07
License:: CC0 1.0 Universal

Type:: Image
Description/Abstract:: This Poster describes a collaborative research project between the Culley and Tepe labs in the UC Department of Biology and UC Libraries Digital Scholarship Center presented at the 2017 UC Data Day ( https://libapps.libraries.uc.edu/blogs/dataday/past-data-days/). The project explores publication patterns of research involving hotspot areas of biodiversity and if researchers from developing countries which tend to have most of the biodiversity hotspots, are adequately represented as authors in the scientific literature indexed in Scopus (TM-Elsevier), JSTOR, and PubMed.
Creator/Author:: Koshoffer, Amy; Torres, Maria; Merritt, Benjamin; Barreiro-Sanchez, José; Johnson, Arlene; Tunison, Robert; Ammar, Marwa; Tepe, Eric; Elam, Robert; Philpott, Megan; Culley, Theresa, and Lee, James
Submitter:: Amy Koshoffer
Date Uploaded:: 10/27/2018
Date Modified:: 05/23/2019
Date Created:: 2017-03
License:: Attribution-NonCommercial-ShareAlike 4.0 International

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